Service Centre category(ies)
Description of the Service Centre
Genoinseq grants access to the full potential of state-of-the-art of next generation sequencing equipment, high throughput genotyping and bioinformatics data analysis. Genoinseq provides services or collaborates in R&D projects with companies and research groups. The unit has a multidisciplinary team of experts in sequencing and bioinformatics, delivering personalized solutions, from consultancy in experimental design to large scale data analysis with user-friendly outputs.
Service Centre web address
Contact person's name
Conceição Egas
Contact person's e-mail
cegas@biocant.pt
Contact person's telephone
+351 231 249 170
Last edited on
2014-09-11 12:40:45
Service
Next generation DNA/RNA sequencing
Available for external use?
Yes
Comments
- De novo genome sequencing - Exome sequencing - Transcriptomics (RNASeq and small RNA) - Metagenomics
Service
High throughput genotyping
Available for external use?
Yes
Comments
- flexible SNP genotyping with Taqman probes in an array format from 16 to 256 SNPs per sample in the OpenArray platform (Life Technologies).
Service
Large scale bioinformatics data processing and analysis
Available for external use?
Yes
Comments
Open Source or proprietary pipelines for: - De novo genome assembly - Genome resequencing - Exome sequencing (mapping, variant calling and variant prioritization) - Differential gene expression (RNA-seq) - Structure and composition of microbial comunities (Metabiodiverse/Qiime)
Equipment
454 GS FLX+ sequencing platform
Service type: self-service or full-service?
Full-service
Comments
- Bacterial and small eukaryote genome sequencing or resequencing - Non-model organism transcriptomics (RNASeq) - Metagenomics
Equipment
OpenArray Genotyping platform
Service type: self-service or full-service?
Full-service
Comments
Flexible SNP genotyping with Taqman probes in an array format from 16 to 256 SNPs per sample for: - Gene disease association studies - Pharmacogenomcis - Identity testing/sample barcoding - Marker-assisted breeding programs. - Philogeography.
Equipment
Ion Proton sequencing platform
Service type: self-service or full-service?
Full-service
Comments
- Exome sequencing - RNA Sequencing (RNASeq or smallRNASeq) - Gene panels (ready-to-use or custom)