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Service Centre

GENOINSEQ

BIOCANT - Biotechnology Innovation Center

Service Centre category(ies)

Genomics / Gene Expression Analysis / DNA Sequencing / DNA Synthesis / Real-Time PCR / Genotyping / Microarray

Description of the Service Centre

Genoinseq grants access to the full potential of state-of-the-art of next generation sequencing equipment, high throughput genotyping and bioinformatics data analysis. Genoinseq provides services or collaborates in R&D projects with companies and research groups. The unit has a multidisciplinary team of experts in sequencing and bioinformatics, delivering personalized solutions, from consultancy in experimental design to large scale data analysis with user-friendly outputs.

Service Centre web address

www.genoinseq.com

Contact person's name

Conceição Egas

Contact person's e-mail

cegas@biocant.pt

Contact person's telephone

+351 231 249 170

Last edited on

2014-09-11 12:40:45

Services

Service

Next generation DNA/RNA sequencing

Available for external use?

Yes

Comments

- De novo genome sequencing - Exome sequencing - Transcriptomics (RNASeq and small RNA) - Metagenomics

Service

High throughput genotyping

Available for external use?

Yes

Comments

- flexible SNP genotyping with Taqman probes in an array format from 16 to 256 SNPs per sample in the OpenArray platform (Life Technologies).

Service

Large scale bioinformatics data processing and analysis

Available for external use?

Yes

Comments

Open Source or proprietary pipelines for: - De novo genome assembly - Genome resequencing - Exome sequencing (mapping, variant calling and variant prioritization) - Differential gene expression (RNA-seq) - Structure and composition of microbial comunities (Metabiodiverse/Qiime)

Equipments

Equipment

454 GS FLX+ sequencing platform

Service type: self-service or full-service?

Full-service

Comments

- Bacterial and small eukaryote genome sequencing or resequencing - Non-model organism transcriptomics (RNASeq) - Metagenomics

Equipment

OpenArray Genotyping platform

Service type: self-service or full-service?

Full-service

Comments

Flexible SNP genotyping with Taqman probes in an array format from 16 to 256 SNPs per sample for: - Gene disease association studies - Pharmacogenomcis - Identity testing/sample barcoding - Marker-assisted breeding programs. - Philogeography.

Equipment

Ion Proton sequencing platform

Service type: self-service or full-service?

Full-service

Comments

- Exome sequencing - RNA Sequencing (RNASeq or smallRNASeq) - Gene panels (ready-to-use or custom)

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